STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB61171.1Putative permease; KEGG: apb:SAR116_1372 1.4e-65 xanthine/uracil permease K03458; Psort location: CytoplasmicMembrane, score: 10.00. (462 aa)    
Predicted Functional Partners:
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
  
 0.930
KXB61168.1
Hypothetical protein; KEGG: csh:Closa_1046 8.7e-27 molybdopterin-guanine dinucleotide biosynthesis protein A; K07141 molybdenum cofactor cytidylyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.824
KXB61170.1
Putative selenium-dependent hydroxylase accessory protein YqeC; KEGG: cap:CLDAP_01030 5.7e-11 hypothetical protein; K07141 molybdenum cofactor cytidylyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
     0.822
KXB61169.1
Selenium-dependent molybdenum hydroxylase system protein, YqeB family; Psort location: Cytoplasmic, score: 8.96.
       0.778
pyrB
KEGG: csh:Closa_2185 2.2e-133 aspartate carbamoyltransferase; K00609 aspartate carbamoyltransferase catalytic subunit; Psort location: Cytoplasmic, score: 9.97; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
  
 0.751
pyrF
KEGG: csh:Closa_1598 9.0e-112 orotidine 5'-phosphate decarboxylase K01591; Psort location: Cytoplasmic, score: 8.96; Belongs to the OMP decarboxylase family. Type 2 subfamily.
  
  
 0.731
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
  
 0.723
carA
KEGG: csh:Closa_1281 2.5e-141 carbamoyl-phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit; Psort location: Cytoplasmic, score: 9.97; Belongs to the CarA family.
  
  
 0.712
KXB60840.1
Dihydropyrimidinase; KEGG: csh:Closa_1037 1.1e-122 dihydropyrimidinase; K01464 dihydropyrimidinase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.693
pyrC
Putative dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
  
  
 0.682
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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