STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB61065.1SIS domain protein; KEGG: lln:LLNZ_12130 2.7e-48 GmhA protein; K03271 D-sedoheptulose 7-phosphate isomerase; Psort location: Cytoplasmic, score: 9.26. (199 aa)    
Predicted Functional Partners:
KXB61063.1
GHMP kinase protein; KEGG: taz:TREAZ_0677 1.1e-97 ghmp kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase.
 
 0.996
KXB61072.1
GHMP kinase protein; KEGG: sri:SELR_05810 2.3e-122 hypothetical protein; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase; Psort location: Cytoplasmic, score: 8.96.
 
 0.988
KXB55371.1
D,D-heptose 1,7-bisphosphate phosphatase; KEGG: sri:SELR_05920 7.2e-103 hypothetical protein; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase; Psort location: Cytoplasmic, score: 9.97.
 
 0.973
KXB61064.1
NAD dependent epimerase/dehydratase family protein; KEGG: taz:TREAZ_0678 1.3e-89 dTDP-glucose 4,6-dehydratase; K01784 UDP-glucose 4-epimerase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.848
KXB61066.1
Hypothetical protein; KEGG: rdn:HMPREF0733_10836 6.3e-08 brp/Blh family beta-carotene 15,15'-monooxygenase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.757
KXB61067.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00.
       0.750
KXB61069.1
Glycosyltransferase, group 2 family protein; KEGG: cbi:CLJ_B2936 6.2e-33 putative glycosyltransferase; Psort location: CytoplasmicMembrane, score: 7.88.
   
   0.741
KXB61068.1
Putative O-antigen export system ATP-binding protein RfbB; KEGG: gth:Geoth_0298 6.0e-67 Teichoic-acid-transporting ATPase K09691; Psort location: CytoplasmicMembrane, score: 7.88.
       0.725
KXB61071.1
Glycosyltransferase, group 2 family protein; KEGG: sat:SYN_02660 1.6e-31 glycosyltransferase; Psort location: CytoplasmicMembrane, score: 7.88.
   
   0.706
KXB61070.1
Glycosyltransferase, group 2 family protein; KEGG: nmp:NMBB_1343 3.3e-27 putative glycosyl transferase; Psort location: CytoplasmicMembrane, score: 7.88.
       0.686
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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