STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60762.1TIGR02452 family protein; Psort location: Cytoplasmic, score: 8.96. (297 aa)    
Predicted Functional Partners:
KXB56861.1
Hypothetical protein; KEGG: vvm:VVMO6_02987 7.9e-12 hypothetical protein; K01497 GTP cyclohydrolase II; Psort location: Cytoplasmic, score: 9.97.
     0.882
KXB60763.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.584
KXB60764.1
Addiction module toxin, Txe/YoeB family; KEGG: sfl:SF2076 9.6e-05 yoeB; hypothetical protein; K01175.
       0.584
KXB60410.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.583
kptA
Putative RNA 2'-phosphotransferase-like protein; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
 
     0.556
KXB60761.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.547
KXB60677.1
Hypothetical protein.
  
     0.500
KXB60675.1
ATPase family protein; KEGG: kcr:Kcr_1472 2.3e-13 ATPase; K03924 MoxR-like ATPase; Psort location: Cytoplasmic, score: 8.96.
  
     0.488
KXB60227.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.486
KXB56983.1
KEGG: rho:RHOM_07925 1.2e-36 PTS system, beta-glucosides-specific IIA component / PTS system, beta-glucosides-specific IIB component / PTS system, beta-glucosides-specific IIC component; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757; Psort location: CytoplasmicMembrane, score: 9.82.
      
 0.476
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.