STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60787.1KEGG: bmd:BMD_0259 1.3e-11 CAAX amino terminal protease family protein K07052; Psort location: CytoplasmicMembrane, score: 10.00. (269 aa)    
Predicted Functional Partners:
KXB60788.1
Glycosyltransferase, group 2 family protein; KEGG: lsi:HN6_00008 5.5e-89 rfaG; Glycosyltransferase; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.804
KXB55781.1
HAD hydrolase, family IA, variant 1; KEGG: cbt:CLH_0997 1.9e-47 HAD hydrolase; K01091 phosphoglycolate phosphatase; Psort location: Cytoplasmic, score: 9.97.
 
    0.748
KXB60785.1
KEGG: ccm:Ccan_09160 6.9e-66 ABC transporter ATP-binding protein yknY K02003; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.478
KXB60784.1
Efflux transporter, RND family, MFP subunit; KEGG: ase:ACPL_5132 5.1e-05 cusB; DNA-directed RNA polymerase subunit beta'; Psort location: Extracellular, score: 9.64.
       0.476
KXB60786.1
Efflux ABC transporter, permease protein; KEGG: mms:mma_1065 5.9e-53 macrolide ABC efllux protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.476
KXB60783.1
Hypothetical protein; KEGG: cex:CSE_02000 0.00032 putative nucleotidase.
       0.468
KXB60383.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.436
KXB58070.1
Cell wall-binding repeat protein; KEGG: sor:SOR_1423 8.4e-13 cell wall hydrolase/autolysin K01448.
   
   0.412
KXB56684.1
Cell wall-binding repeat protein; KEGG: sor:SOR_1423 1.4e-11 cell wall hydrolase/autolysin K01448.
   
   0.412
KXB57419.1
SH3 domain protein; KEGG: cno:NT01CX_0726 7.2e-12 Beta-N-acetylglucosaminidase; K01227 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; Psort location: OuterMembrane, score: 9.49.
    
   0.410
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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