STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60585.1Hypothetical protein. (63 aa)    
Predicted Functional Partners:
KXB53557.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 6.3e-28 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
    
 0.756
KXB56900.1
KEGG: csh:Closa_1699 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
  
 
  0.702
KXB60584.1
Hypothetical protein.
       0.605
KXB60586.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.456
KXB60587.1
Hypothetical protein; KEGG: lbu:LBUL_0521 0.0021 pseudouridylate synthase, 23S RNA-specific; K06180 23S rRNA pseudouridine1911/1915/1917 synthase.
       0.442
KXB60588.1
Hypothetical protein.
       0.442
KXB60590.1
Helicase protein; KEGG: ate:Athe_0464 5.9e-38 non-specific serine/threonine protein kinase; Psort location: Cytoplasmic, score: 8.96.
  
    0.440
KXB60589.1
Hypothetical protein.
       0.439
KXB60591.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.420
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.