STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60589.1Hypothetical protein. (55 aa)    
Predicted Functional Partners:
KXB60590.1
Helicase protein; KEGG: ate:Athe_0464 5.9e-38 non-specific serine/threonine protein kinase; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB60587.1
Hypothetical protein; KEGG: lbu:LBUL_0521 0.0021 pseudouridylate synthase, 23S RNA-specific; K06180 23S rRNA pseudouridine1911/1915/1917 synthase.
       0.768
KXB60588.1
Hypothetical protein.
       0.768
KXB60586.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.741
KXB60591.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.732
KXB60592.1
Hypothetical protein.
       0.485
KXB60593.1
Hypothetical protein; KEGG: rrj:RrIowa_1450 0.0076 ferroxidase K04047; Psort location: Cytoplasmic, score: 8.96.
       0.485
KXB60594.1
Hypothetical protein.
       0.485
KXB60595.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.485
KXB60596.1
KEGG: shn:Shewana3_3590 1.3e-16 single-strand binding protein K03111; Psort location: Cytoplasmic, score: 9.26.
       0.485
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.