STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60634.1Toxin secretion/phage lysis holin; Psort location: CytoplasmicMembrane, score: 10.00. (142 aa)    
Predicted Functional Partners:
KXB60621.1
Phage tail tape measure protein, TP901 family; KEGG: bya:BANAU_2613 2.0e-32 phage tail like protein.
 
    0.866
KXB60633.1
Cell wall-binding repeat protein; KEGG: snb:SP670_0097 1.3e-18 autolysin.
       0.752
KXB60629.1
Hypothetical protein.
       0.566
KXB60631.1
Hypothetical protein; KEGG: dte:Dester_1252 0.0054 ATP synthase subunit gamma; K02115 F-type H+-transporting ATPase subunit gamma.
       0.562
KXB60632.1
Hypothetical protein.
       0.562
KXB60628.1
Phage tail protein; Psort location: Cytoplasmic, score: 8.96.
       0.560
KXB60630.1
Hypothetical protein.
       0.551
KXB58178.1
Hypothetical protein; KEGG: asf:SFBM_0085 0.0095 tRNA (Uracil-5-)-methyltransferase-like protein; K03215 23S rRNA (uracil1939-C5)-methyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.548
KXB60624.1
Hypothetical protein.
       0.546
KXB60626.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.544
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.