STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60668.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (475 aa)    
Predicted Functional Partners:
KXB55756.1
Hypothetical protein; KEGG: fnu:FN0522 4.9e-06 exonuclease SbcC K03546; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.804
KXB60667.1
KEGG: cbm:CBF_3362 1.4e-26 clpP-2; ATP-dependent Clp protease, proteolytic subunit ClpP K01358; Psort location: Cytoplasmic, score: 9.97.
       0.773
KXB52917.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.731
KXB52900.1
Hypothetical protein.
 
     0.729
KXB55759.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.727
KXB55760.1
Hypothetical protein.
 
     0.727
KXB60669.1
Metallo-beta-lactamase domain protein; KEGG: fnu:FN1162 4.3e-08 hydroxyacylglutathione hydrolase K01069; Psort location: Cytoplasmic, score: 8.96.
       0.709
KXB60670.1
Thioesterase family protein; KEGG: reh:H16_A0188 8.5e-13 h16_A0188; thioesterase; Psort location: Cytoplasmic, score: 8.96.
       0.597
KXB60666.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.578
KXB57709.1
Hypothetical protein; KEGG: scl:sce8204 7.6e-18 helicase.
   
 
 0.510
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.