STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60679.1Acetyltransferase, GNAT family; KEGG: taz:TREAZ_2776 5.2e-45 N-acetyltransferase Ats1; Psort location: Cytoplasmic, score: 9.97. (156 aa)    
Predicted Functional Partners:
KXB56900.1
KEGG: csh:Closa_1699 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
    
  0.799
KXB59537.1
Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
      0.707
KXB60414.1
KEGG: cbt:CLH_2581 2.7e-222 5-methyltetrahydrofolate--homocysteine methyltransferase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 9.97.
    
  0.705
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.692
KXB60678.1
Hypothetical protein.
       0.570
KXB60677.1
Hypothetical protein.
       0.500
KXB60676.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.494
KXB60675.1
ATPase family protein; KEGG: kcr:Kcr_1472 2.3e-13 ATPase; K03924 MoxR-like ATPase; Psort location: Cytoplasmic, score: 8.96.
       0.488
KXB60674.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.473
KXB60673.1
SWIM zinc finger domain protein; KEGG: mif:Metin_0774 0.00031 CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA; Psort location: Cytoplasmic, score: 8.96.
       0.461
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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