STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60517.1Hypothetical protein. (49 aa)    
Predicted Functional Partners:
KXB60516.1
KEGG: msp:Mspyr1_53740 1.5e-40 arsenical-resistance protein; K03325 arsenite transporter, ACR3 family; K03741 arsenate reductase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
KXB60518.1
Hypothetical protein; KEGG: sdg:SDE12394_07245 5.1e-38 tRNA (uracil-5-)-methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
       0.773
KXB60519.1
Hypothetical protein; KEGG: btk:BT9727_1151 5.0e-08 acetyltransferase K00680; Psort location: Cytoplasmic, score: 8.96.
       0.566
KXB60520.1
Acetyltransferase, GNAT family; KEGG: fnu:FN0055 1.3e-18 ribosomal-protein-alanine acetyltransferase K00676; Psort location: Cytoplasmic, score: 8.96.
       0.566
KXB60515.1
Putative arsenite-transporting ATPase; KEGG: dsy:DSY4598 8.6e-210 hypothetical protein; K01551 arsenite-transporting ATPase; Psort location: Cytoplasmic, score: 8.96.
       0.536
KXB60514.1
KEGG: ctu:Ctu_3p00370 7.1e-25 arsD; Arsenical resistance operon trans-acting repressor arsD; Psort location: Cytoplasmic, score: 8.96.
       0.529
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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