STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60479.1Hypothetical protein; KEGG: edi:EDI_341030 3.9e-07 intracellular protein transport protein USO1; Psort location: OuterMembrane, score: 9.49. (1263 aa)    
Predicted Functional Partners:
KXB60484.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.896
KXB60485.1
FHA domain protein; KEGG: ddi:DDB_G0271708 0.0011 ddx31; DEAD/DEAH box helicase; K14806 ATP-dependent RNA helicase DDX31/DBP7.
 
     0.876
KXB60475.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.871
KXB60476.1
Bacterial type II secretion system protein F domain protein; KEGG: ccs:CCNA_03035 0.0072 tyrosine phenol-lyase K12511; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.862
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
  0.786
KXB60474.1
Type II/IV secretion system protein; KEGG: reh:H16_A0983 2.1e-87 cpaF3; flp pilus assembly ATPase CpaF K02283; Psort location: Cytoplasmic, score: 9.97.
 
     0.784
scpA
ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.774
KXB60478.1
Hypothetical protein.
       0.773
KXB53557.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 6.3e-28 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
    
  0.768
KXB60480.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.762
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.