STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60483.1Hypothetical protein; KEGG: ava:Ava_2519 9.8e-06 serine/threonine protein kinase K00908. (430 aa)    
Predicted Functional Partners:
KXB60484.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.816
KXB60485.1
FHA domain protein; KEGG: ddi:DDB_G0271708 0.0011 ddx31; DEAD/DEAH box helicase; K14806 ATP-dependent RNA helicase DDX31/DBP7.
 
     0.802
KXB60482.1
Peptidase, A24 family; KEGG: ccl:Clocl_0432 1.2e-15 Flp pilus assembly protein, protease CpaA; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.790
KXB60486.1
Hypothetical protein; KEGG: cac:CA_C0035 1.7e-37 Serine/threonine phosphatase (inactivated protein); K01090 protein phosphatase; Psort location: Cytoplasmic, score: 8.96.
       0.746
KXB60487.1
Kinase domain protein; KEGG: bco:Bcell_3568 6.2e-113 serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial; Psort location: CytoplasmicMembrane, score: 7.88.
       0.746
KXB60488.1
Hypothetical protein.
       0.746
KXB60489.1
Hypothetical protein; KEGG: cpf:CPF_1123 5.0e-15 cell wall-associated serine proteinase K01361; Psort location: OuterMembrane, score: 9.49.
       0.746
KXB60479.1
Hypothetical protein; KEGG: edi:EDI_341030 3.9e-07 intracellular protein transport protein USO1; Psort location: OuterMembrane, score: 9.49.
 
     0.684
KXB60480.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.630
KXB60481.1
Hypothetical protein.
       0.630
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.