STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60489.1Hypothetical protein; KEGG: cpf:CPF_1123 5.0e-15 cell wall-associated serine proteinase K01361; Psort location: OuterMembrane, score: 9.49. (779 aa)    
Predicted Functional Partners:
KXB60485.1
FHA domain protein; KEGG: ddi:DDB_G0271708 0.0011 ddx31; DEAD/DEAH box helicase; K14806 ATP-dependent RNA helicase DDX31/DBP7.
 
     0.912
KXB60484.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.900
KXB60487.1
Kinase domain protein; KEGG: bco:Bcell_3568 6.2e-113 serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial; Psort location: CytoplasmicMembrane, score: 7.88.
 
    0.882
KXB60486.1
Hypothetical protein; KEGG: cac:CA_C0035 1.7e-37 Serine/threonine phosphatase (inactivated protein); K01090 protein phosphatase; Psort location: Cytoplasmic, score: 8.96.
 
     0.815
KXB56900.1
KEGG: csh:Closa_1699 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
  
   0.791
KXB60482.1
Peptidase, A24 family; KEGG: ccl:Clocl_0432 1.2e-15 Flp pilus assembly protein, protease CpaA; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.785
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
  0.778
KXB53557.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 6.3e-28 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
    
  0.778
KXB60488.1
Hypothetical protein.
       0.773
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.772
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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