STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60366.1Putative cell division protein FtsL. (161 aa)    
Predicted Functional Partners:
KXB60371.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.941
KXB60367.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: csh:Closa_2464 2.2e-181 peptidoglycan glycosyltransferase K08384; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.887
rsmH
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
       0.831
KXB60537.1
KEGG: pfh:PFHG_04267 0.0026 hypothetical protein similar to DNA polymerase epsilon catalytic subunit A; K02324 DNA polymerase epsilon subunit 1.
  
     0.775
KXB60080.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.775
KXB58066.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.775
KXB56343.1
Hypothetical protein; KEGG: pml:ATP_00238 3.4e-05 cca; CCA-adding enzyme (tRNA adenylyl-/cytidylyl-transferase) (tRNA CCA-pyrophosphorylase); K00974 tRNA nucleotidyltransferase (CCA-adding enzyme); Psort location: Cytoplasmic, score: 8.96.
  
     0.775
KXB53508.1
Hypothetical protein; KEGG: ccb:Clocel_4033 0.0092 CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA; Psort location: Cytoplasmic, score: 8.96.
  
     0.775
KXB52836.1
Hypothetical protein; KEGG: lbj:LBJ_1060 0.0039 adenylate cyclase-like protein; K01768 adenylate cyclase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.775
KXB57571.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.774
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.