STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60379.1NLPA lipoprotein; KEGG: pfe:PSF113_0025 1.3e-57 nlpA; protein NlpA K02073; Psort location: CytoplasmicMembrane, score: 9.97; Belongs to the nlpA lipoprotein family. (293 aa)    
Predicted Functional Partners:
KXB60378.1
KEGG: pfe:PSF113_0026 2.0e-45 D-Methionine ABC transporter permease protein K02072; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
KXB57798.1
KEGG: pfe:PSF113_0026 1.2e-45 D-Methionine ABC transporter permease protein K02072; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 0.996
metN-2
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 0.993
KXB60215.1
Hypothetical protein; KEGG: crn:CAR_c21600 1.5e-72 adenosylhomocysteinase; Psort location: Cytoplasmic, score: 8.96.
  
 0.867
KXB57785.1
ABC transporter, substrate-binding protein, family 3; KEGG: bde:BDP_0690 1.7e-76 glnH; glutamine-binding protein glnH K02030; Psort location: Periplasmic, score: 9.76.
 
  
 0.797
KXB60380.1
N-acetylmuramoyl-L-alanine amidase; KEGG: cpy:Cphy_2080 2.0e-08 cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase.
       0.773
KXB60415.1
Putative homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein; KEGG: cls:CXIVA_07610 2.0e-153 hypothetical protein; K00547 homocysteine S-methyltransferase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.614
KXB53456.1
KEGG: bth:BT_1923 1.6e-162 O-acetylhomoserine (thiol)-lyase; K01740 O-acetylhomoserine (thiol)-lyase; Psort location: Cytoplasmic, score: 9.97.
  
    0.602
KXB60376.1
Putative dipeptidase PepV; KEGG: csh:Closa_2341 1.3e-149 dipeptidase; K01439 succinyl-diaminopimelate desuccinylase; Psort location: Cytoplasmic, score: 8.96.
       0.522
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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