STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60380.1N-acetylmuramoyl-L-alanine amidase; KEGG: cpy:Cphy_2080 2.0e-08 cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase. (376 aa)    
Predicted Functional Partners:
KXB60621.1
Phage tail tape measure protein, TP901 family; KEGG: bya:BANAU_2613 2.0e-32 phage tail like protein.
 
    0.810
KXB58070.1
Cell wall-binding repeat protein; KEGG: sor:SOR_1423 8.4e-13 cell wall hydrolase/autolysin K01448.
  
 
 0.802
KXB56684.1
Cell wall-binding repeat protein; KEGG: sor:SOR_1423 1.4e-11 cell wall hydrolase/autolysin K01448.
  
 
 0.802
KXB60379.1
NLPA lipoprotein; KEGG: pfe:PSF113_0025 1.3e-57 nlpA; protein NlpA K02073; Psort location: CytoplasmicMembrane, score: 9.97; Belongs to the nlpA lipoprotein family.
       0.773
KXB55294.1
Cell wall-binding repeat protein; KEGG: cbt:CLH_2946 4.6e-13 surface protein PspC; K01448 N-acetylmuramoyl-L-alanine amidase.
 
 
 0.771
KXB60598.1
CHC2 zinc finger domain protein; KEGG: epr:EPYR_00059 1.0e-13 putative P4-specific DNA primase K06919.
  
     0.768
KXB57419.1
SH3 domain protein; KEGG: cno:NT01CX_0726 7.2e-12 Beta-N-acetylglucosaminidase; K01227 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; Psort location: OuterMembrane, score: 9.49.
  
 
 0.729
KXB54867.1
Cell wall-binding repeat protein; KEGG: cbk:CLL_A2241 2.4e-11 phage lysozyme K01185; Psort location: Extracellular, score: 9.64.
  
 
 0.716
KXB60408.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.695
KXB60597.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.673
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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