STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60246.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (208 aa)    
Predicted Functional Partners:
KXB60245.1
ATPase, AAA family; KEGG: bpb:bpr_III099 1.3e-80 hflB4; ATP-dependent metallopeptidase HflB4; Psort location: CytoplasmicMembrane, score: 7.88.
       0.773
KXB60247.1
Hypothetical protein.
       0.773
KXB60244.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.559
KXB60248.1
Hypothetical protein; KEGG: pml:ATP_00434 0.0050 uvrD; ATP-dependent DNA helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 8.96.
       0.542
KXB53545.1
ADP-ribosylglycohydrolase; KEGG: cls:CXIVA_07340 4.2e-82 hypothetical protein; K05521 ADP-ribosylglycohydrolase.
 
      0.412
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.