STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60143.1ABC transporter, solute-binding protein; Psort location: Cytoplasmic, score: 8.96. (404 aa)    
Predicted Functional Partners:
KXB59775.1
ABC transporter, permease protein; KEGG: ppy:PPE_00791 2.7e-25 L-arabinose transporter permease araP K10189; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.769
KXB60470.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
  0.762
KXB60142.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.739
KXB59776.1
ABC transporter, permease protein; KEGG: cyp:PCC8801_2231 5.4e-27 monosaccharide-transporting ATPase K02026; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.724
KXB59774.1
KEGG: apb:SAR116_1199 2.7e-14 family 1 extracellular solute-binding protein K02027.
  
     0.719
KXB52988.1
ABC transporter, ATP-binding protein; KEGG: txy:Thexy_0509 1.2e-130 glycerol-3-phosphate-transporting ATPase K10112; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the ABC transporter superfamily.
  
 0.715
KXB59778.1
Heparinase II/III-like protein; KEGG: spz:M5005_Spy_0518 2.7e-48 oligohyaluronate lyase K06036; Psort location: Cytoplasmic, score: 8.96.
  
     0.645
KXB60472.1
ABC transporter, permease protein; KEGG: pmo:Pmob_0956 3.7e-44 monosaccharide-transporting ATPase K10190; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.640
KXB57163.1
KEGG: apb:SAR116_1198 2.4e-24 sugar ABC transporter permease K02025; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.617
KXB57162.1
ABC transporter, permease protein; KEGG: tex:Teth514_2199 1.7e-39 monosaccharide-transporting ATPase K02026; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.589
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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