STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60170.1Hypothetical protein; KEGG: edi:EDI_341030 0.00023 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96. (622 aa)    
Predicted Functional Partners:
KXB60171.1
WD domain, G-beta repeat protein; KEGG: hhy:Halhy_6674 1.2e-09 (myosin heavy-chain) kinase; Psort location: OuterMembrane, score: 9.49.
       0.781
KXB53572.1
Putative cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
     
 0.601
KXB61235.1
Cyclic nucleotide-binding domain protein; KEGG: clo:HMPREF0868_0893 3.8e-11 pflA; pyruvate formate-lyase 1-activating enzyme K04069; Psort location: Cytoplasmic, score: 9.97.
   
 
  0.541
KXB59187.1
KEGG: cac:CA_C0799 1.8e-42 psd; phosphatidylserine decarboxylase; K01613 phosphatidylserine decarboxylase; Psort location: Cytoplasmic, score: 8.96.
   
 
  0.541
KXB55608.1
Flavodoxin-like protein; KEGG: sgo:SGO_2084 3.9e-63 quinone family NAD(P)H dehydrogenase; K00355 NAD(P)H dehydrogenase (quinone); Psort location: Cytoplasmic, score: 9.26.
   
 
 0.518
galT
Putative UTP--hexose-1-phosphate uridylyltransferase; KEGG: eel:EUBELI_01845 1.2e-178 galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.490
KXB61081.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
    
  0.439
KXB60166.1
Oxidoreductase, aldo/keto reductase family protein; KEGG: bde:BDP_0326 2.4e-120 oxidoreductase; Psort location: Cytoplasmic, score: 9.97.
       0.437
KXB60167.1
KEGG: shn:Shewana3_3300 1.8e-11 chromate transporter K07240; Psort location: CytoplasmicMembrane, score: 10.00.
       0.437
KXB60168.1
KEGG: apb:SAR116_1094 1.5e-12 chromate transporter K07240; Psort location: CytoplasmicMembrane, score: 10.00.
       0.437
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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