STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60178.1Helicase protein; KEGG: cls:CXIVA_04310 0. hypothetical protein; K01153 type I restriction enzyme, R subunit; Psort location: Cytoplasmic, score: 8.96. (1097 aa)    
Predicted Functional Partners:
KXB60177.1
KEGG: cdl:CDR20291_2911 6.4e-63 restriction modification system dna specificity domain; K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.960
KXB60175.1
KEGG: lay:LAB52_07120 1.4e-76 restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.950
KXB60174.1
N-6 DNA Methylase; KEGG: cls:CXIVA_04340 1.1e-207 hypothetical protein; K03427 type I restriction enzyme M protein; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.934
KXB60173.1
N-6 DNA Methylase; KEGG: gyc:GYMC61_0285 7.6e-27 N-6 DNA methylase; K03427 type I restriction enzyme M protein; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.788
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.782
KXB60176.1
Site-specific recombinase, phage integrase family; KEGG: teq:TEQUI_0823 4.5e-55 Type I restriction-modification system, specificity subunit S; Psort location: Cytoplasmic, score: 9.97; Belongs to the 'phage' integrase family.
 
     0.695
KXB54923.1
KEGG: smb:smi_1609 1.0e-215 type I restriction-modification system DNA methylase; K03427 type I restriction enzyme M protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.626
KXB55751.1
Helicase protein; KEGG: ase:ACPL_5928 1.7e-165 F-box DNA helicase protein 1; Psort location: OuterMembrane, score: 9.49.
  
 
 0.579
KXB56922.1
Hypothetical protein; KEGG: ipo:Ilyop_1055 3.8e-46 N-6 DNA methylase; K03427 type I restriction enzyme M protein.
  
 
 0.578
KXB59211.1
KEGG: csh:Closa_4061 2.0e-59 hypoxanthine phosphoribosyltransferase K00760; Psort location: Cytoplasmic, score: 9.97; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
 0.415
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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