STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60088.1Pyridine nucleotide-disulfide oxidoreductase; KEGG: cst:CLOST_2294 2.4e-86 molybdopterin oxidoreductase; K00123 formate dehydrogenase, alpha subunit; Psort location: Cytoplasmic, score: 9.97. (610 aa)    
Predicted Functional Partners:
KXB60089.1
Putative ferredoxin hydrogenase; KEGG: scc:Spico_0354 3.2e-187 hydrogenase, Fe-only; K00336 NADH-quinone oxidoreductase subunit G.
 0.999
KXB60839.1
Putative selenate reductase, YgfK subunit; KEGG: bpo:BP951000_0727 0. gltD; glutamate synthase GltD; K12527 putative selenate reductase; Psort location: Cytoplasmic, score: 9.97.
 
0.998
KXB56900.1
KEGG: csh:Closa_1699 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
 
 0.998
rnfB
Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
   
 0.991
KXB55516.1
4Fe-4S binding domain protein; KEGG: ols:Olsu_1376 2.5e-164 ferredoxin hydrogenase.
  
 0.991
KXB56321.1
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 0.989
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.982
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.982
KXB56335.1
Oxidoreductase NAD-binding domain protein; KEGG: rho:RHOM_06745 1.9e-111 ferredoxin-NADP(+) reductase subunit alpha K00528; Psort location: Cytoplasmic, score: 9.97.
 0.978
KXB54865.1
Flavocytochrome c; KEGG: dhd:Dhaf_4309 6.4e-182 flavocytochrome C; K00244 fumarate reductase flavoprotein subunit; Psort location: Periplasmic, score: 9.44.
  
 
 0.963
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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