STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60017.1Bacterial sugar transferase; KEGG: nth:Nther_2523 1.2e-63 undecaprenyl-phosphate galactose phosphotransferase; Psort location: CytoplasmicMembrane, score: 9.82. (218 aa)    
Predicted Functional Partners:
KXB60016.1
KEGG: bpb:bpr_I2543 1.2e-171 DegT/DnrJ/EryC1/StrS family aminotransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.966
KXB60014.1
Polysaccharide biosynthesis protein; KEGG: lsi:HN6_00820 2.3e-184 UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase; Psort location: CytoplasmicMembrane, score: 9.16.
 
 0.940
KXB60011.1
KEGG: cpy:Cphy_1213 3.5e-46 exopolysaccharide tyrosine-protein kinase; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
 0.920
KXB60018.1
ATP-grasp domain protein; KEGG: fsu:Fisuc_2651 5.6e-119 carbamoyl phosphate synthase-like protein; K01955 carbamoyl-phosphate synthase large subunit; Psort location: Cytoplasmic, score: 8.96.
     0.870
KXB60026.1
KEGG: fsu:Fisuc_2693 3.4e-144 UDP-glucose 4-epimerase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.862
KXB60210.1
KEGG: aur:HMPREF9243_1662 3.3e-50 amsE; amylovoran biosynthesis glycosyltransferase AmsE; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.836
KXB60025.1
Polysaccharide biosynthesis protein; KEGG: cco:CCC13826_0528 4.5e-11 cytosol aminopeptidase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.810
KXB59520.1
Glycosyltransferase, group 2 family protein; KEGG: nde:NIDE3430 8.8e-114 putative methyltransferase and glycosyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.807
KXB60010.1
Chain length determinant protein; KEGG: cpy:Cphy_1213 1.7e-39 exopolysaccharide tyrosine-protein kinase.
 
  
 0.797
KXB60022.1
Hypothetical protein; KEGG: ecg:E2348C_3870 4.7e-08 rfaL; lipid A-core: surface polymer ligase; K02847 O-antigen ligase; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.781
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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