STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60018.1ATP-grasp domain protein; KEGG: fsu:Fisuc_2651 5.6e-119 carbamoyl phosphate synthase-like protein; K01955 carbamoyl-phosphate synthase large subunit; Psort location: Cytoplasmic, score: 8.96. (320 aa)    
Predicted Functional Partners:
carA
KEGG: csh:Closa_1281 2.5e-141 carbamoyl-phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit; Psort location: Cytoplasmic, score: 9.97; Belongs to the CarA family.
  
 0.986
pyrB
KEGG: csh:Closa_2185 2.2e-133 aspartate carbamoyltransferase; K00609 aspartate carbamoyltransferase catalytic subunit; Psort location: Cytoplasmic, score: 9.97; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.962
KXB53568.1
Aspartate carbamoyltransferase regulatory chain, allosteric domain protein; KEGG: rho:RHOM_10050 9.4e-46 aspartate carbamoyltransferase regulatory subunit K00610; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.936
argG
KEGG: csh:Closa_3289 4.6e-195 argininosuccinate synthase K01940; Psort location: Cytoplasmic, score: 9.97; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 
 0.922
KXB60016.1
KEGG: bpb:bpr_I2543 1.2e-171 DegT/DnrJ/EryC1/StrS family aminotransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the DegT/DnrJ/EryC1 family.
 
     0.898
KXB60363.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
 
 0.890
KXB56353.1
KEGG: cle:Clole_1571 2.0e-185 amidophosphoribosyltransferase K00764; Psort location: Cytoplasmic, score: 8.96; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
 
 0.887
KXB60017.1
Bacterial sugar transferase; KEGG: nth:Nther_2523 1.2e-63 undecaprenyl-phosphate galactose phosphotransferase; Psort location: CytoplasmicMembrane, score: 9.82.
     0.870
KXB59985.1
KEGG: csh:Closa_1348 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.94.
  
 
 0.866
pyrD
Dihydroorotate oxidase, catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.
  
 0.813
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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