STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60023.1KEGG: pit:PIN17_A1552 2.1e-34 glycosyltransferase, group 1 family protein; Psort location: Cytoplasmic, score: 8.96. (361 aa)    
Predicted Functional Partners:
KXB60021.1
Glycosyltransferase, group 1 family protein; KEGG: ctc:CTC02266 3.4e-17 glycosyl transferase K00754; Psort location: Cytoplasmic, score: 8.96.
 
     0.925
KXB60028.1
NAD dependent epimerase/dehydratase family protein; KEGG: sud:ST398NM01_0168 5.4e-82 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.889
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.879
KXB60022.1
Hypothetical protein; KEGG: ecg:E2348C_3870 4.7e-08 rfaL; lipid A-core: surface polymer ligase; K02847 O-antigen ligase; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.872
KXB60025.1
Polysaccharide biosynthesis protein; KEGG: cco:CCC13826_0528 4.5e-11 cytosol aminopeptidase; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.853
KXB55371.1
D,D-heptose 1,7-bisphosphate phosphatase; KEGG: sri:SELR_05920 7.2e-103 hypothetical protein; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase; Psort location: Cytoplasmic, score: 9.97.
 
 0.847
KXB60024.1
Hypothetical protein; KEGG: rcu:RCOM_0115300 1.8e-10 transferase, transferring glycosyl groups, putative; Psort location: Cytoplasmic, score: 8.96.
 
     0.820
KXB60027.1
KEGG: llr:llh_0480 9.6e-179 UDP-N-acetylglucosamine 2-epimerase K01791; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.820
KXB60018.1
ATP-grasp domain protein; KEGG: fsu:Fisuc_2651 5.6e-119 carbamoyl phosphate synthase-like protein; K01955 carbamoyl-phosphate synthase large subunit; Psort location: Cytoplasmic, score: 8.96.
 
     0.808
KXB60026.1
KEGG: fsu:Fisuc_2693 3.4e-144 UDP-glucose 4-epimerase; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.806
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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