STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB59534.1Transcriptional regulator, RpiR family; KEGG: hip:CGSHiEE_02570 2.4e-17 N-acetylmannosamine kinase; Psort location: Cytoplasmic, score: 9.97. (268 aa)    
Predicted Functional Partners:
KXB56983.1
KEGG: rho:RHOM_07925 1.2e-36 PTS system, beta-glucosides-specific IIA component / PTS system, beta-glucosides-specific IIB component / PTS system, beta-glucosides-specific IIC component; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.947
KXB56900.1
KEGG: csh:Closa_1699 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
  
 
  0.921
KXB56984.1
KEGG: cbe:Cbei_4532 6.7e-203 PTS system, N-acetylglucosamine-specific IIBC subunit; K02803 PTS system, N-acetylglucosamine-specific IIB component K02804; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.803
KXB52985.1
KEGG: cls:CXIVA_15100 7.6e-163 NagE; phosphotransferase system IIA component; K02808 PTS system, sucrose-specific IIA component; K02809 PTS system, sucrose-specific IIB component K02810; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.803
KXB59528.1
ABC transporter, solute-binding protein; KEGG: snc:HMPREF0837_10106 0.0043 maltose/maltodextrin ABC transporter ATP-binding protein K10108.
 
     0.796
KXB59529.1
ABC transporter, permease protein; KEGG: sis:LS215_1162 4.4e-32 binding-protein-dependent transport system inner membrane protein K02025; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.639
KXB59533.1
Ketose-bisphosphate aldolase; KEGG: mas:Mahau_0254 2.2e-46 fructose-bisphosphate aldolase K01624; Psort location: Cytoplasmic, score: 9.97.
    
  0.632
KXB59530.1
ABC transporter, permease protein; KEGG: trq:TRQ2_0338 2.8e-40 monosaccharide-transporting ATPase K02026; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.616
KXB59532.1
Hypothetical protein; KEGG: ske:Sked_02970 3.2e-61 hypothetical protein; K00918 ADP-dependent phosphofructokinase/glucokinase; Psort location: Cytoplasmic, score: 8.96.
       0.581
KXB59531.1
KEGG: csh:Closa_0607 2.7e-96 ketose-bisphosphate aldolase K01624; Psort location: Cytoplasmic, score: 9.97.
    
  0.575
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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