STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB59308.1Cell wall-binding repeat protein; KEGG: cbe:Cbei_4698 2.3e-14 cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase. (324 aa)    
Predicted Functional Partners:
KXB57374.1
Cell wall-binding repeat protein; KEGG: spv:SPH_0067 4.9e-17 lytic amidase (N-acetylmuramoyl-L-alanine amidase) K01447.
  
     0.775
KXB58056.1
Cell wall-binding repeat protein; KEGG: spv:SPH_2087 2.4e-14 autolysin K01446.
  
     0.774
KXB55040.1
Tetratricopeptide repeat protein; KEGG: cbk:CLL_A3204 1.4e-10 surface protein PspC; K01448 N-acetylmuramoyl-L-alanine amidase.
  
     0.774
KXB54874.1
Cell wall-binding repeat protein; KEGG: sjj:SPJ_0618 1.1e-14 putative endo-beta-N-acetylglucosaminidase (Murein hydrolase).
  
     0.774
KXB55294.1
Cell wall-binding repeat protein; KEGG: cbt:CLH_2946 4.6e-13 surface protein PspC; K01448 N-acetylmuramoyl-L-alanine amidase.
  
     0.773
KXB52632.1
Cell wall-binding repeat protein; KEGG: lme:LEUM_0857 2.1e-17 glycosyl hydrolase; K00689 dextransucrase.
  
     0.771
KXB59535.1
Cell wall-binding repeat protein; KEGG: sor:SOR_1423 6.9e-21 cell wall hydrolase/autolysin K01448; Psort location: OuterMembrane, score: 9.52.
  
     0.760
KXB55521.1
SCP-like protein; KEGG: spv:SPH_2087 3.1e-06 autolysin K01446.
  
     0.758
KXB56684.1
Cell wall-binding repeat protein; KEGG: sor:SOR_1423 1.4e-11 cell wall hydrolase/autolysin K01448.
  
     0.757
KXB58070.1
Cell wall-binding repeat protein; KEGG: sor:SOR_1423 8.4e-13 cell wall hydrolase/autolysin K01448.
  
     0.752
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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