STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB59329.1Beta-eliminating lyase; KEGG: clb:Clo1100_1733 2.1e-215 tryptophanase; K01667 tryptophanase; Psort location: Cytoplasmic, score: 8.96. (561 aa)    
Predicted Functional Partners:
KXB59330.1
Sodium:neurotransmitter symporter family protein; KEGG: hip:CGSHiEE_08435 9.7e-44 dihydroxy-acid dehydratase K03308; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.815
trpA
Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
     
 0.801
trpB-2
Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
     
 0.789
KXB59328.1
YheO-like protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.625
KXB60042.1
Cysteine synthase A; KEGG: eel:EUBELI_00752 8.0e-120 cysteine synthase; K01738 cysteine synthase A; Psort location: Cytoplasmic, score: 9.97; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.537
KXB54877.1
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; KEGG: ctu:CTU_37370 1.9e-13 gltP; glutamate/aspartate:proton symporter K11102; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
     0.456
KXB53448.1
Prevent-host-death family protein.
  
     0.413
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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