STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB59169.1KEGG: csh:Closa_0400 1.3e-167 dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase; Psort location: Cytoplasmic, score: 9.97; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (340 aa)    
Predicted Functional Partners:
KXB59517.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
 0.999
KXB59168.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 0.999
KXB59170.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
 0.999
KXB60028.1
NAD dependent epimerase/dehydratase family protein; KEGG: sud:ST398NM01_0168 5.4e-82 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.979
KXB60029.1
Nucleotide sugar dehydrogenase; KEGG: llr:llh_0455 1.8e-170 UDP-glucose dehydrogenase K00012; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.937
KXB59193.1
KEGG: epr:EPYR_00998 1.6e-80 vioA; aminotransferase, DegT/DnrJ/EryC1/StrS family; Psort location: Cytoplasmic, score: 9.97; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.921
KXB53535.1
KEGG: tra:Trad_0038 1.8e-28 transferase hexapeptide repeat containing protein; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase; Psort location: Cytoplasmic, score: 8.96.
    
 0.913
KXB59520.1
Glycosyltransferase, group 2 family protein; KEGG: nde:NIDE3430 8.8e-114 putative methyltransferase and glycosyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.910
KXB60016.1
KEGG: bpb:bpr_I2543 1.2e-171 DegT/DnrJ/EryC1/StrS family aminotransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.906
KXB59185.1
UDP-galactopyranose mutase; KEGG: bwe:BcerKBAB4_5059 1.2e-139 UDP-galactopyranose mutase; K01854 UDP-galactopyranose mutase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.906
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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