STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB58519.1Hypothetical protein. (84 aa)    
Predicted Functional Partners:
KXB58517.1
Hypothetical protein.
       0.723
KXB58518.1
Hypothetical protein.
       0.723
KXB58516.1
Cell wall-binding repeat protein; KEGG: spv:SPH_2087 5.8e-15 autolysin K01446; Psort location: Cytoplasmic, score: 8.96.
       0.524
KXB58515.1
Toxin secretion/phage lysis holin; Psort location: CytoplasmicMembrane, score: 9.82.
       0.450
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.