STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB58481.1YbaK/proline--tRNA ligase associated domain protein; KEGG: thl:TEH_12800 2.5e-14 putative acetyltransferase; Psort location: Cytoplasmic, score: 8.96. (191 aa)    
Predicted Functional Partners:
xylB
Xylulokinase; KEGG: bpb:bpr_I0173 4.1e-187 xylB; xylulokinase XylB K00854; Psort location: Cytoplasmic, score: 9.97.
 
     0.804
KXB58479.1
Antioxidant, AhpC/TSA family; KEGG: afn:Acfer_0645 4.3e-57 peroxiredoxin K03564.
       0.773
KXB58480.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; Belongs to the UPF0246 family.
       0.773
KXB58482.1
Hypothetical protein; KEGG: bbp:BBPR_1310 1.2e-70 ImpB/MucB/SamB family protein K03502; Psort location: Cytoplasmic, score: 8.96.
       0.773
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.