STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB57775.1Hypothetical protein. (51 aa)    
Predicted Functional Partners:
KXB57776.1
Putative oligopeptide ABC transporter, permease protein AppB; KEGG: bmd:BMD_1703 8.7e-59 nikB; nickel import ABC transporter permease subunit NikB K15585; Psort location: CytoplasmicMembrane, score: 10.00.
       0.535
KXB57777.1
Putative dipeptide ABC transporter, permease protein DppC; KEGG: bmi:BMEA_B0781 2.4e-56 nikC; nickel transporter permease NikC K15586; Psort location: CytoplasmicMembrane, score: 10.00.
       0.535
KXB57778.1
ABC transporter, substrate-binding protein, family 5; KEGG: smd:Smed_3647 1.5e-29 4-phytase K02035; Psort location: Periplasmic, score: 10.00.
       0.480
KXB57779.1
Dipeptide ABC transporter, ATP-binding protein DppD family protein; KEGG: ssg:Selsp_1123 7.7e-51 Nickel-transporting ATPase K02031; Psort location: CytoplasmicMembrane, score: 10.00.
       0.480
KXB57774.1
KEGG: shi:Shel_04760 0. anaerobic ribonucleoside triphosphate reductase; K00527 ribonucleoside-triphosphate reductase; Psort location: Cytoplasmic, score: 9.97.
       0.458
KXB57780.1
ABC transporter, ATP-binding protein; KEGG: lan:Lacal_1101 6.2e-49 Fe(3+)-transporting ATPase K02031:K02032; Psort location: CytoplasmicMembrane, score: 9.98.
       0.419
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.