STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB57786.1Glutamine ABC transporter, ATP-binding protein GlnQ; KEGG: rho:RHOM_04530 6.7e-84 Fe(3+)-transporting ATPase; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88. (273 aa)    
Predicted Functional Partners:
KXB57787.1
KEGG: hpa:HPAG1_1109 4.5e-46 glutamine ABC transporter, permease protein K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
KXB57788.1
ABC transporter, permease protein; KEGG: cco:CCC13826_0661 2.8e-62 6,7-dimethyl-8-ribityllumazine synthase K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 0.998
KXB59131.1
ABC transporter, permease protein; KEGG: rcm:A1E_00665 8.9e-34 sdhA; succinate dehydrogenase flavoprotein subunit K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 0.997
KXB57785.1
ABC transporter, substrate-binding protein, family 3; KEGG: bde:BDP_0690 1.7e-76 glnH; glutamine-binding protein glnH K02030; Psort location: Periplasmic, score: 9.76.
 0.997
KXB60863.1
ABC transporter, permease protein; KEGG: rcm:A1E_00665 2.8e-30 sdhA; succinate dehydrogenase flavoprotein subunit K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 0.984
KXB59132.1
ABC transporter, substrate-binding protein, family 3; KEGG: ssr:SALIVB_0520 2.0e-31 glnP; glutamine ABC transporter permease and substrate binding protein K02029:K02030; Psort location: Periplasmic, score: 10.00; Belongs to the bacterial solute-binding protein 3 family.
 0.965
KXB56339.1
KEGG: har:HEAR2680 1.1e-40 high-affinity branched-chain amino acid ABC transporter ATP-binding protein K01995:K01998; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.904
KXB60786.1
Efflux ABC transporter, permease protein; KEGG: mms:mma_1065 5.9e-53 macrolide ABC efllux protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
      0.900
KXB60657.1
ABC transporter, ATP-binding protein; KEGG: hiq:CGSHiGG_06600 1.6e-96 aroE; shikimate 5-dehydrogenase K06148; Psort location: CytoplasmicMembrane, score: 10.00.
 
     
0.898
KXB53168.1
ABC transporter, ATP-binding protein; KEGG: sgg:SGGBAA2069_c08430 3.7e-186 multidrug resistance ABC transporter ABC/membrane protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
     
0.898
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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