STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB57794.1Thioredoxin; KEGG: azo:azo1030 9.3e-23 trxA1; thioredoxin-disulfide reductase K03671; Psort location: Cytoplasmic, score: 9.26; Belongs to the thioredoxin family. (102 aa)    
Predicted Functional Partners:
KXB57793.1
Putative thioredoxin-disulfide reductase; KEGG: cls:CXIVA_12000 3.1e-95 TrxB; thioredoxin reductase; K00384 thioredoxin reductase (NADPH); Psort location: Cytoplasmic, score: 9.97.
 
 0.998
KXB57371.1
KEGG: apv:Apar_0907 1.6e-160 thioredoxin-disulfide reductase K00384; Psort location: Cytoplasmic, score: 9.97.
  
 0.991
KXB60775.1
KEGG: faa:HMPREF0389_01558 7.3e-39 protein-tyrosine-phosphatase, low molecular weight; K01104 protein-tyrosine phosphatase.
  
 
 0.864
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 0.863
groL
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
 
 0.858
KXB60839.1
Putative selenate reductase, YgfK subunit; KEGG: bpo:BP951000_0727 0. gltD; glutamate synthase GltD; K12527 putative selenate reductase; Psort location: Cytoplasmic, score: 9.97.
  
 0.840
KXB54039.1
KEGG: csh:Closa_0829 1.4e-154 glyceraldehyde-3-phosphate dehydrogenase, type I K00134; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.810
KXB60414.1
KEGG: cbt:CLH_2581 2.7e-222 5-methyltetrahydrofolate--homocysteine methyltransferase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 9.97.
    
 0.783
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.
 
  
 0.765
KXB57370.1
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 
 0.701
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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