STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB57801.1Putative potassium transporter peripheral membrane component; KEGG: scp:HMPREF0833_11023 7.0e-89 ktrA; Trk family potassium (K+) transporter, NAD+ binding protein K03499; Psort location: CytoplasmicMembrane, score: 7.88. (456 aa)    
Predicted Functional Partners:
KXB57800.1
Cation transport protein; KEGG: ssr:SALIVB_0283 2.9e-99 DNA polymerase IV K03498; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.992
KXB56387.1
Potassium uptake protein, TrkH family; KEGG: ral:Rumal_3700 8.0e-120 H(+)-transporting two-sector ATPase K03498; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.774
KXB53557.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 6.3e-28 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
    
 0.758
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
  0.745
KXB54903.1
Putative ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.587
KXB56900.1
KEGG: csh:Closa_1699 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
  
 
 0.579
KXB57798.1
KEGG: pfe:PSF113_0026 1.2e-45 D-Methionine ABC transporter permease protein K02072; Psort location: CytoplasmicMembrane, score: 10.00.
       0.551
metN-2
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
       0.551
KXB57802.1
Hypothetical protein.
       0.527
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
  
 0.527
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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