STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB57580.1Putative MucBP domain protein; KEGG: isc:IscW_ISCW000348 7.0e-23 secreted mucin MUC17, putative. (2517 aa)    
Predicted Functional Partners:
KXB59096.1
RHS repeat-associated core domain protein; Psort location: Cytoplasmic, score: 8.96.
  
 0.754
KXB56978.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.572
KXB55031.1
Hypothetical protein; KEGG: fnu:FN0522 3.3e-05 exonuclease SbcC K03546; Psort location: Cytoplasmic, score: 8.96.
  
 0.533
KXB55035.1
Type VII secretion protein EssC; KEGG: ppo:PPM_p0073 8.4e-16 topB; DNA topoisomerase III; Psort location: CytoplasmicMembrane, score: 9.97.
    
 
 0.504
KXB53468.1
Hypothetical protein; KEGG: mmw:Mmwyl1_1672 4.3e-05 beta strand repeat-containing protein; Psort location: Extracellular, score: 9.64.
   
 0.493
KXB54911.1
FtsK/SpoIIIE family protein; KEGG: eab:ECABU_c09310 7.8e-122 ftsK; cell division protein FtsK K03466; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the FtsK/SpoIIIE/SftA family.
    
   0.485
KXB60505.1
Hypothetical protein.
  
 0.482
KXB54916.1
GDSL-like protein; KEGG: agr:AGROH133_05923 6.6e-29 ada; arylesterase; Psort location: Cytoplasmic, score: 8.96.
    
  0.472
KXB60481.1
Hypothetical protein.
   
  0.429
KXB57672.1
Hypothetical protein; KEGG: isc:IscW_ISCW000348 6.9e-19 secreted mucin MUC17, putative.
   
  0.429
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.