STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB57352.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (283 aa)    
Predicted Functional Partners:
KXB57351.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.697
KXB57350.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.657
KXB57353.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.616
KXB57354.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.584
KXB57355.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.573
codY
CodY helix-turn-helix protein; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.
       0.525
KXB57357.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.524
KXB57356.1
KEGG: spd:SPD_0909 3.4e-32 GNAT family acetyltransferase; K00680; Psort location: Cytoplasmic, score: 8.96.
  
    0.523
KXB57358.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.507
KXB57359.1
Hypothetical protein.
       0.507
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.