STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB57163.1KEGG: apb:SAR116_1198 2.4e-24 sugar ABC transporter permease K02025; Psort location: CytoplasmicMembrane, score: 10.00. (299 aa)    
Predicted Functional Partners:
KXB57162.1
ABC transporter, permease protein; KEGG: tex:Teth514_2199 1.7e-39 monosaccharide-transporting ATPase K02026; Psort location: CytoplasmicMembrane, score: 10.00.
  0.977
KXB57167.1
ABC transporter, solute-binding protein; KEGG: apb:SAR116_1509 5.2e-05 extracellular solute-binding domain-containing protein; Psort location: Cytoplasmic, score: 8.96.
  
  0.967
KXB57164.1
ABC transporter, solute-binding protein; KEGG: bsa:Bacsa_2386 0.0064 Trans-hexaprenyltranstransferase K02523.
 
  0.958
KXB52988.1
ABC transporter, ATP-binding protein; KEGG: txy:Thexy_0509 1.2e-130 glycerol-3-phosphate-transporting ATPase K10112; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the ABC transporter superfamily.
 
 0.952
KXB57170.1
Sugar-binding domain protein; KEGG: bst:GYO_3955 4.7e-28 D-ribose-binding protein K10439; Psort location: Periplasmic, score: 9.44.
    
  0.937
rbsA
Putative galactose/methyl galactoside ABC transporter, ATP-binding protein MglA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
    
  0.937
KXB57173.1
Sugar-binding domain protein; KEGG: ypi:YpsIP31758_1507 4.0e-38 rbsB2; ribose ABC transporter periplasmic protein K10439; Psort location: Periplasmic, score: 9.76.
    
  0.929
KXB60472.1
ABC transporter, permease protein; KEGG: pmo:Pmob_0956 3.7e-44 monosaccharide-transporting ATPase K10190; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.911
KXB57428.1
ABC transporter, permease protein; KEGG: hor:Hore_20500 2.9e-35 monosaccharide-transporting ATPase K02026; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.907
KXB56970.1
ABC transporter, permease protein; KEGG: ttr:Tter_2023 4.5e-39 sugar ABC transporter ATPase K02026; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.906
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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