STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB57176.1CorA-like protein; Psort location: CytoplasmicMembrane, score: 10.00. (299 aa)    
Predicted Functional Partners:
KXB57177.1
YigZ family protein; KEGG: ctc:CTC02216 4.7e-35 thymidylate synthase K00560; Psort location: Cytoplasmic, score: 9.97.
  
    0.802
KXB57174.1
KEGG: csh:Closa_3033 7.8e-74 ketose-bisphosphate aldolase K01624; Psort location: Cytoplasmic, score: 9.97.
       0.545
KXB57175.1
Kinase, PfkB family; KEGG: cpe:CPE1531 9.6e-16 fructokinase; K00847 fructokinase; Psort location: Cytoplasmic, score: 8.96.
       0.545
KXB57178.1
NC domain protein; KEGG: tpi:TREPR_0881 6.0e-28 lecithin retinol acyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.470
KXB57182.1
Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
 
     0.423
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.