STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB57178.1NC domain protein; KEGG: tpi:TREPR_0881 6.0e-28 lecithin retinol acyltransferase; Psort location: Cytoplasmic, score: 8.96. (231 aa)    
Predicted Functional Partners:
hflX
GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
 
     0.618
KXB57169.1
Histidine kinase; KEGG: sgo:SGO_1896 8.8e-50 sensory transduction histidine kinase; K07778 two-component system, NarL family, sensor histidine kinase DesK; Psort location: CytoplasmicMembrane, score: 9.99.
  
    0.584
KXB57184.1
Ser/Thr phosphatase family protein; KEGG: bce:BC2476 2.3e-28 phosphoesterase K01175; Psort location: Cytoplasmic, score: 8.96.
 
     0.568
KXB57180.1
Tetratricopeptide repeat protein; KEGG: fjo:Fjoh_0229 0.00024 histidine kinase K10819; Psort location: Cytoplasmic, score: 8.96.
     
 0.552
KXB57177.1
YigZ family protein; KEGG: ctc:CTC02216 4.7e-35 thymidylate synthase K00560; Psort location: Cytoplasmic, score: 9.97.
       0.536
KXB57181.1
dUTP diphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.
       0.535
KXB57182.1
Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
       0.531
scpA
ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
       0.531
KXB57482.1
Trypsin; KEGG: pca:Pcar_2948 3.2e-22 degQ; serine endoprotease; K04772 serine protease DegQ.
  
  
 0.496
KXB59319.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ppo:PPM_1089 6.0e-36 yvqE1; hybrid signal transduction histidine kinase B; Psort location: CytoplasmicMembrane, score: 10.00.
   
    0.491
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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