STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB57199.1ATPase family protein; KEGG: btk:BT9727_0535 3.0e-33 norQ; nitric-oxide reductase K04748; Psort location: Cytoplasmic, score: 8.96. (305 aa)    
Predicted Functional Partners:
KXB57200.1
Hypothetical protein.
 
  
 0.972
KXB57198.1
Carbon starvation protein CstA; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.634
KXB56934.1
KEGG: ral:Rumal_3736 5.7e-300 carbon-monoxide dehydrogenase, catalytic subunit K00198; Psort location: Cytoplasmic, score: 9.97.
  
     0.562
KXB54821.1
Orn/Lys/Arg decarboxylase, major domain protein; KEGG: bpb:bpr_I0082 3.1e-69 Orn/Lys/Arg decarboxylase; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.520
KXB60385.1
Von Willebrand factor type A domain protein; KEGG: ptm:GSPATT00038076001 0.0082 hypothetical protein; K06689 ubiquitin-conjugating enzyme E2 D/E; Psort location: OuterMembrane, score: 9.52.
 
 
 0.507
KXB60598.1
CHC2 zinc finger domain protein; KEGG: epr:EPYR_00059 1.0e-13 putative P4-specific DNA primase K06919.
  
     0.417
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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