STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB57202.1KEGG: ssr:SALIVB_0302 9.4e-46 cbiO; cobalt import ATP-binding protein cbiO K02006; Psort location: CytoplasmicMembrane, score: 9.59. (241 aa)    
Predicted Functional Partners:
KXB57368.1
Cobalt transport protein; KEGG: bya:BANAU_0146 4.1e-61 ybaF; putative ABC transporter ATP-binding protein K02008; Psort location: CytoplasmicMembrane, score: 10.00.
 0.993
KXB57203.1
Cobalt transport protein; KEGG: axy:AXYL_01471 0.0021 nuoN; NADH-quinone oxidoreductase chain 14 K00343; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.992
KXB57204.1
Cobalamin biosynthesis protein CbiM; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.991
KXB56799.1
KEGG: rcp:RCAP_rcc02035 1.6e-05 cbiQ2; cobalt ABC transporter permease CbiQ K02008; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.933
cbiM
Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
 
 0.915
KXB54244.1
BioY family protein; KEGG: lml:lmo4a_0615 2.2e-23 BioY family protein K03523; Psort location: CytoplasmicMembrane, score: 10.00.
   
 0.902
KXB53973.1
ABC transporter, ATP-binding protein; KEGG: dku:Desku_2823 1.4e-60 sulfate-transporting ATPase; Psort location: Cytoplasmic, score: 9.12.
 
  
 
0.886
cbiN
Cobalt transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
 
 
 0.834
ureD
Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
     0.823
KXB57287.1
Cobalt transport protein; KEGG: bya:BANAU_0146 5.6e-07 ybaF; putative ABC transporter ATP-binding protein K02008; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.809
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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