STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB56950.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (204 aa)    
Predicted Functional Partners:
KXB56949.1
Erythromycin esterase; KEGG: gfo:GFO_0918 3.3e-22 ereB; erythromycin esterase type II K01066; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB56951.1
Hypothetical protein; KEGG: cfu:CFU_3842 1.7e-15 perM; putative permease; Psort location: CytoplasmicMembrane, score: 10.00.
       0.686
KXB56952.1
Aspartyl aminopeptidase domain protein; KEGG: apv:Apar_0506 1.2e-109 putative aminopeptidase 2; Psort location: Cytoplasmic, score: 9.97.
       0.686
KXB56948.1
KEGG: mct:MCR_0704 2.8e-07 putative heavy metal binding protein K07213.
       0.531
KXB56953.1
Hypothetical protein; KEGG: efu:HMPREF0351_10749 9.8e-26 ABC superfamily ATP binding cassette transporter, membrane protein K02004; Psort location: CytoplasmicMembrane, score: 10.00.
       0.504
KXB56954.1
KEGG: snc:HMPREF0837_11576 2.7e-71 ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 7.88.
       0.504
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.