STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB56805.1KEGG: ere:EUBREC_1925 1.7e-76 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Psort location: Cytoplasmic, score: 9.26. (386 aa)    
Predicted Functional Partners:
KXB56804.1
KEGG: mru:mru_0893 3.3e-75 cbiA3; cobyrinic acid a,c-diamide synthase CbiA3 K02224; Psort location: Cytoplasmic, score: 9.97.
  
 0.997
KXB56806.1
Hypothetical protein; KEGG: cls:CXIVA_17390 1.6e-20 hypothetical protein; K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.993
cobS
Cobalamin-5-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
 
 
 0.993
cobD
Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
 
  
 0.980
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.977
KXB56810.1
Aminotransferase, class I/II; KEGG: cpf:CPF_1295 2.3e-58 threonine-phosphate decarboxylase; Psort location: Cytoplasmic, score: 9.97.
  
 0.955
KXB56812.1
KEGG: ccb:Clocel_2213 3.4e-41 precorrin-8X methylmutase K06042.
 
  
 0.943
KXB56809.1
KEGG: ccb:Clocel_2227 1.3e-78 precorrin-4 C(11)-methyltransferase K05936; Psort location: Cytoplasmic, score: 9.26.
 
  
 0.937
KXB56799.1
KEGG: rcp:RCAP_rcc02035 1.6e-05 cbiQ2; cobalt ABC transporter permease CbiQ K02008; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.868
KXB56797.1
Precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; KEGG: cpy:Cphy_1379 1.6e-68 precorrin-6x reductase; K00595 precorrin-6Y C5,15-methyltransferase / precorrin-8W decarboxylase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.841
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.