STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB56834.1ATP:guanido phosphotransferase, catalytic domain protein; KEGG: cpy:Cphy_3462 2.6e-59 ATP:guanido phosphotransferase; K00936; Psort location: Cytoplasmic, score: 8.96. (345 aa)    
Predicted Functional Partners:
KXB56835.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.996
KXB56833.1
Negative regulator of genetic competence ClpC/MecB; KEGG: saa:SAUSA300_0510 5.7e-245 clpC; endopeptidase K03696; Psort location: Cytoplasmic, score: 9.97; Belongs to the ClpA/ClpB family.
  
 
 0.941
KXB56836.1
KEGG: btk:BT9727_3817 5.4e-11 GntR family transcriptional regulator K07979; Psort location: Cytoplasmic, score: 8.96.
       0.781
clpB
ATP-dependent chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
 
 0.767
KXB53541.1
Ankyrin repeat protein; KEGG: phu:Phum_PHUM288780 0.00029 ankyrin repeat-containing protein, putative; Psort location: Cytoplasmic, score: 8.96.
    
  0.659
KXB53522.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
   0.599
KXB56831.1
Hypothetical protein; KEGG: hma:pNG5066 2.2e-10 putative exo-alpha-sialidase K01186.
 
     0.520
KXB53524.1
Hypothetical protein; KEGG: msy:MS53_0005 0.0034 cdsA; phosphatidate cytidylyltransferase K00981; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.511
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
  
    0.485
KXB53523.1
ABC transporter, ATP-binding protein; KEGG: dca:Desca_0844 5.6e-64 sulfate-transporting ATPase; Psort location: Cytoplasmic, score: 9.12.
  
     0.481
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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