STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB56836.1KEGG: btk:BT9727_3817 5.4e-11 GntR family transcriptional regulator K07979; Psort location: Cytoplasmic, score: 8.96. (129 aa)    
Predicted Functional Partners:
KXB56833.1
Negative regulator of genetic competence ClpC/MecB; KEGG: saa:SAUSA300_0510 5.7e-245 clpC; endopeptidase K03696; Psort location: Cytoplasmic, score: 9.97; Belongs to the ClpA/ClpB family.
       0.827
KXB56834.1
ATP:guanido phosphotransferase, catalytic domain protein; KEGG: cpy:Cphy_3462 2.6e-59 ATP:guanido phosphotransferase; K00936; Psort location: Cytoplasmic, score: 8.96.
       0.781
KXB56835.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.781
KXB54893.1
Hypothetical protein; KEGG: snc:HMPREF0837_11958 8.0e-17 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.657
KXB56830.1
Efflux ABC transporter, permease protein; KEGG: bya:BANAU_1347 2.1e-26 yknZ; Macrolide export ATP-binding/permease protein macB K02004; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.491
KXB56832.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_1698 5.3e-59 phosphonate-transporting ATPase K02003; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.458
KXB56828.1
AICARFT/IMPCHase bienzyme; KEGG: rho:RHOM_09910 6.5e-157 5-aminoimidazole-4-carboxamide ribonucleotide transformylase K00602; Psort location: Cytoplasmic, score: 9.97.
       0.449
KXB56829.1
IMP cyclohydrolase-like protein; KEGG: bpb:bpr_I0731 6.7e-68 purO; IMP cyclohydrolase.
       0.449
KXB56831.1
Hypothetical protein; KEGG: hma:pNG5066 2.2e-10 putative exo-alpha-sialidase K01186.
       0.449
KXB54894.1
KEGG: scp:HMPREF0833_10246 5.8e-62 ABC transporter ATP-binding protein; Psort location: Cytoplasmic, score: 9.12.
  
    0.448
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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