STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB56853.1Hypothetical protein. (145 aa)    
Predicted Functional Partners:
KXB56852.1
Hypothetical protein; KEGG: acl:ACL_0633 2.4e-88 mcrB; McrBC 5-methylcytosine restriction system component; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB56851.1
Hypothetical protein; KEGG: efe:EFER_3084 8.3e-05 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC; Psort location: Cytoplasmic, score: 8.96.
       0.628
KXB56854.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.511
KXB56850.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: ssg:Selsp_0428 9.9e-122 Dihydrolipoyl dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
       0.474
KXB56848.1
Diaminopimelate dehydrogenase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate.
       0.406
KXB56849.1
Hypothetical protein.
       0.406
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.