STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB56858.1Acetyltransferase, GNAT family; KEGG: fna:OOM_0294 3.2e-13 acetyltransferase; Psort location: Cytoplasmic, score: 8.96. (151 aa)    
Predicted Functional Partners:
KXB56900.1
KEGG: csh:Closa_1699 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
    
  0.918
KXB56859.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.727
KXB60757.1
Chorismate mutase; KEGG: cno:NT01CX_0622 2.3e-19 chorismate mutase; K04093 chorismate mutase.
    
  0.709
KXB53574.1
Prephenate dehydratase; KEGG: bpb:bpr_I1730 1.8e-74 pheA; chorismate mutase K14170; Psort location: Cytoplasmic, score: 9.97.
    
  0.709
aroK-2
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
    
  0.680
KXB56857.1
Hypothetical protein.
       0.613
KXB53522.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.540
KXB61176.1
Cell wall-binding repeat protein.
  
     0.514
KXB61267.1
Peptidase propeptide and YPEB domain protein.
  
     0.490
KXB57505.1
Hypothetical protein; KEGG: fnu:FN0522 1.0e-06 exonuclease SbcC K03546.
  
     0.488
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.