STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB56864.1Hypothetical protein. (61 aa)    
Predicted Functional Partners:
KXB56865.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB56866.1
Hypothetical protein; KEGG: edi:EDI_048910 0.00011 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB56867.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB56868.1
Helicase protein; KEGG: lsg:lse_1929 2.6e-34 recQ1; ATP-dependent DNA helicase; K03654 ATP-dependent DNA helicase RecQ; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB56869.1
Helicase protein; KEGG: sri:SELR_10630 3.4e-160 putative helicase; K03580 ATP-dependent helicase HepA; Psort location: Cytoplasmic, score: 9.97.
       0.773
KXB56870.1
Hypothetical protein; KEGG: sce:YNL250W 0.0025 RAD50; Rad50p K10866.
       0.693
KXB56871.1
UvrD/REP helicase; KEGG: gka:GK1383 3.0e-62 hypothetical protein; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 9.97.
       0.474
KXB56872.1
Aminotransferase, class V; KEGG: cbt:CLH_1927 4.7e-99 cysteine desulfurase; K04487 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97.
       0.457
KXB56873.1
Hypothetical protein; KEGG: fnu:FN0522 0.0049 exonuclease SbcC K03546; Psort location: Cytoplasmic, score: 8.96.
       0.457
KXB56874.1
Putative DNA sulfur modification protein DndE; Psort location: Cytoplasmic, score: 8.96.
       0.434
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.