STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB56684.1Cell wall-binding repeat protein; KEGG: sor:SOR_1423 1.4e-11 cell wall hydrolase/autolysin K01448. (546 aa)    
Predicted Functional Partners:
KXB57419.1
SH3 domain protein; KEGG: cno:NT01CX_0726 7.2e-12 Beta-N-acetylglucosaminidase; K01227 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; Psort location: OuterMembrane, score: 9.49.
 
 
 0.958
KXB53516.1
KEGG: ere:EUBREC_0966 3.3e-82 N-acetylmuramoyl-L-alanine amidase domain protein; K01448 N-acetylmuramoyl-L-alanine amidase; Psort location: Extracellular, score: 9.64.
 
 
 0.940
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.919
KXB56359.1
Peptidoglycan binding domain protein; KEGG: bha:BH3665 3.4e-31 lytC; N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase.
 
 
 0.891
KXB55294.1
Cell wall-binding repeat protein; KEGG: cbt:CLH_2946 4.6e-13 surface protein PspC; K01448 N-acetylmuramoyl-L-alanine amidase.
 
 
 0.866
KXB60388.1
KEGG: cno:NT01CX_0795 4.0e-15 N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase.
 
 
 0.841
KXB59520.1
Glycosyltransferase, group 2 family protein; KEGG: nde:NIDE3430 8.8e-114 putative methyltransferase and glycosyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.827
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
  0.822
KXB58127.1
Choline/ethanolamine kinase; KEGG: tpl:TPCCA_0107 1.3e-133 putative bifunctional choline-phosphate cytidylyltransferase/choline kinase; Psort location: Cytoplasmic, score: 8.96.
 
     0.822
KXB60380.1
N-acetylmuramoyl-L-alanine amidase; KEGG: cpy:Cphy_2080 2.0e-08 cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase.
  
 
 0.802
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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