STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB56332.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (207 aa)    
Predicted Functional Partners:
KXB56331.1
Hydrolase, NUDIX family; KEGG: aae:aq_158 5.1e-15 apfA; AP4A hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase; Psort location: Cytoplasmic, score: 8.96; Belongs to the Nudix hydrolase family.
       0.773
KXB56333.1
KEGG: csh:Closa_2935 4.3e-50 dihydrofolate reductase subunit; K00287 dihydrofolate reductase.
       0.773
KXB56334.1
Kinase, PfkB family; KEGG: csh:Closa_1656 1.6e-128 PfkB domain-containing protein; K00874 2-dehydro-3-deoxygluconokinase; Psort location: Cytoplasmic, score: 8.96.
       0.596
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
       0.574
KXB56330.1
Peptidase, U32 family; KEGG: csh:Closa_2235 1.4e-177 peptidase U32; K08303 putative protease; Psort location: Cytoplasmic, score: 8.96.
       0.574
ruvA
Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.
       0.539
KXB56335.1
Oxidoreductase NAD-binding domain protein; KEGG: rho:RHOM_06745 1.9e-111 ferredoxin-NADP(+) reductase subunit alpha K00528; Psort location: Cytoplasmic, score: 9.97.
       0.411
KXB56336.1
Glutamate synthase; KEGG: csh:Closa_2933 6.6e-196 glutamate synthase (NADPH), homotetrameric; K00266 glutamate synthase (NADPH/NADH) small chain; Psort location: Cytoplasmic, score: 9.97.
       0.411
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.